PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00045.1_g00059.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 140aa    MW: 16139 Da    PI: 10.0197
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00045.1_g00059.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.23.7e-081581463
                             XCHHHCHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1  4 lkrerrkqkNReAArrsRqRKka.......eieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                              k+ +rk +NRe+ArrsR++K++       ei  Le+++ke ++  k  + +l++l+ e a+l+se+
  Rsa1.0_00045.1_g00059.1 15 EKKRKRKLSNRESARRSRLKKQKmmedtihEISTLERRIKEYSERCKVARRRLDSLESENAALRSEK 81
                             5999******************83333333456799999999999999999********99999986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.2E-101095No hitNo description
SMARTSM003388.1E-101276IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.7031477IPR004827Basic-leucine zipper domain
PfamPF077161.2E-61455IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.22E-71671No hitNo description
CDDcd147021.82E-101768No hitNo description
PROSITE patternPS0003601934IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006521Biological Processregulation of cellular amino acid metabolic process
GO:0009267Biological Processcellular response to starvation
GO:0009617Biological Processresponse to bacterium
GO:0009651Biological Processresponse to salt stress
GO:0009901Biological Processanther dehiscence
GO:0010182Biological Processsugar mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MANAEKTSSG SDIDEKKRKR KLSNRESARR SRLKKQKMME DTIHEISTLE RRIKEYSERC  60
KVARRRLDSL ESENAALRSE KTWLSSYVRD LENMMATSTS LTLTQSGGDD QNANADGDCR  120
RRPWQQYGCD SLQPVASFKT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11421EKKRKRKL
21520KKRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3527591e-114AK352759.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-02-E19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013660817.12e-94PREDICTED: basic leucine zipper 1-like
SwissprotQ9FGX21e-75BZIP1_ARATH; Basic leucine zipper 1
TrEMBLA0A078IFD53e-93A0A078IFD5_BRANA; BnaA09g03330D protein
TrEMBLA0A0D3E0X64e-93A0A0D3E0X6_BRAOL; Uncharacterized protein
STRINGBra010035.1-P1e-74(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM125812231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49450.14e-62basic leucine-zipper 1